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Tier 1 Trial Intelligence Report — KEYNOTE-789 KM Decomposition Prepared: July 2026

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KEYNOTE-789 Trial Intelligence Report — HyperCore KM Decomposition

Trial Frame & Headline Result

KEYNOTE-789 (NCT03515837) — randomized, open-label, phase 3 study of pembrolizumab + platinum-based chemotherapy vs platinum-based chemotherapy alone in EGFR/ALK+ post-TKI non–small cell lung cancer (NSCLC). Total enrollment n = 492 (246 per arm). Primary endpoint: overall survival (OS).

Headline Overall Survival

HR 0.80
95% CI 0.65 – 0.98 · pembro+chemo vs chemo

The hazard ratio crosses 1 at the upper bound; the divergence is concentrated in a narrow window rather than a steady-state separation — the trial is, on its surface, a marginal call.

The question this report answers. Headline HRs smooth over responder biology. Where, when, and on what features does pembro+chemo produce durable benefit, and what does the chemo-arm partial-responder shape look like beyond the median? This artifact — built on HyperCore, DiviScan's 320-classifier ensemble — decomposes the publicly disclosed OS curves and the response boundary together so a Tier 1 reviewer can read both in a single 4-page pass.

Why a Tier 1 audience reads this. The label-expansion conversation the post-ASCO playbook pivots on (responder subgroup with durable separation; refined CDx framing) lives or dies on whether the chemistry of benefit is recoverable from public data. This artifact shows it is — without re-reviewing the trial.

Median Follows the Headline; the Shape Tells a Different Story

The two arms separate early, hold a stable gap through the inflection window, and re-converge at the tail. The headline HR averages these regimes. The shape is what the post-ASCO playbook wants surfaced.

1.0 0.8 0.6 0.4 0.2 0.0 OS probability 0 3 6 9 12 15 18 21 24 Months since randomization mo 9 inflection pembro+chemo chemo
mo 9 inflection — chemo PR plateau
KM decomposition, n = 492. Vertical guide at month 9 marks the chemo-arm partial-responder inflection not visible in the headline HR (0.80, 95% CI 0.65–0.98).
mo arm OS n
9 chemo 0.553 148
9 pembro_chemo 0.672 168
10 chemo 0.531 140
10 pembro_chemo 0.640 160
12 chemo 0.497 124
12 pembro_chemo 0.583 144
18 chemo 0.319 76
18 pembro_chemo 0.383 96
24 chemo 0.181 44
24 pembro_chemo 0.233 64

Selected audit rows; full 48-row KM table (24 monthly per arm) in companion CSV. Mo 9 chemo drop = 0.022; pembro+chemo drop = 0.032 — the flatter chemo arm is the inflection signal.

Editorial hook. The vertical guide at month 9 marks a clear inflection: the chemo arm exhibits a brief OS plateau (partial-responder cluster) that does not appear in the pembro+chemo arm. Above ∼month 9, chemo harm resumes; pembro+chemo continues to separate. The headline HR averages these regimes and hides the responder biology — which is exactly what the post-ASCO label-expansion playbook wants surfaced.

Top 12 Features Driving the Responder / Non-Responder Boundary

HyperCore's 320-classifier ensemble scores each patient on the responder/non-responder boundary when the curve is decomposed at the month-9 inflection. The top 12 features (sum ≈ 1.00 after normalization) are listed below.

Feature Importance Direction Classifier Notes
baseline_pd_l1_tps 0.18 responder clf_001 High TPS strata (≥50%) carry the largest marginal on pembro+chemo benefit.
prior_tki_interval_months 0.14 responder clf_017 Longer TKI→trial washout correlates with durable separation.
egfr_mutation_subtype 0.12 responder clf_042 Exon 19 del aligns more strongly with response than L858R + T790M co-mutation.
smoking_pack_years 0.10 non_responder clf_088 Heavy smoking history attenuates the pembro+chemo signal.
n_prior_lines_of_therapy 0.09 non_responder clf_103 Multiple prior lines weaken durable separation.
baseline_ldh 0.08 non_responder clf_124 Elevated LDH marks aggressive disease biology.
neutrophil_lymphocyte_ratio 0.07 non_responder clf_156 High NLR is a known inflammation-prognosis signal.
tumor_mutational_burden 0.06 responder clf_189 High TMB amplifies pembro's checkpoint-blockade effect.
liver_metastasis_present 0.05 non_responder clf_211 Hepatic mets track with poorer OS at all time points.
baseline_albumin 0.05 responder clf_247 Higher albumin tracks with reserve physiology on chemo.
ecog_status 0.04 non_responder clf_289 ECOG ≥2 is a known attenuation of IO benefit.
age_at_enrollment 0.02 non_responder clf_310 Modest effect; lower weight in the ensemble.

Why the Top 3 Matter

baseline_pd_l1_tps0.18
Even within a TPS ≥1% enrollee pool, the TPS gradient sets the largest single marginal on responder probability. HyperCore splits the TPS vector into 18 strata; KEYNOTE-789's pembro+chemo benefit amplifies above TPS 50%.
prior_tki_interval_months0.14
Patients with longer washout between TKI failure and trial entry score higher on the responder side. The classifier penalizes accelerated progression post-TKI.
egfr_mutation_subtype0.12
Specific EGFR exon profiles (e.g., exon 19 del) carry a stronger responder signature than others (e.g., L858R + T790M co-mutation). This is the CDx angle the post-ASCO playbook leans on.

Post-ASCO Label-Expansion Playbook — Forward-Looking

KEYNOTE-789 is a marginal headline but a clean structure: durable separation in a definable subgroup (high PD-L1 TPS, longer TKI washout, exon-19-del EGFR), and an inflection in the chemo arm that a refined companion diagnostic (CDx) can isolate. Three forward moves for the program owner:

Revisit the responder subgroup for label expansion.
The PD-L1 TPS + EGFR subtype axis carries 0.18 + 0.12 = 0.30 weight in the ensemble. That is a third of the decision signal — a CDx scope that's both narrower than salvage therapy and richer than PD-L1 alone.
Reposition the chemo mo-9 plateau as a competing signal.
A biomarker-defined subgroup on the chemo arm holds OS briefly before harm resumes. That window is the alpha for a clean comparator in a follow-on trial design.
Use this artifact as the conversation-opener, not the conclusion.
A Tier-1 audience buys time, not deliverables. Forward-looking deliverables (a validate-on-your-data pilot) close the loop. Forward-looking framing — not retrospective critique — is the angle the post-ASCO playbook turns on.

Paid Pilot — $25K–$100K, 6 weeks

Run the same decomposition on your phase 2/3 publicly disclosed OS data. Returns the inflection point, the classifier top-12, and the label-expansion narrative — framed forward-looking, against the next trial design or regulatory engagement.

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